Transcript: ENST00000469381.1 GSE1-004

Description

Gse1 coiled-coil protein [Source:HGNC Symbol;Acc:28979]

Gene Synonyms

KIAA0182

Location

Chromosome 16: 85,695,897-85,709,810 forward strand.

About this transcript

This transcript has 5 exons, is associated with 11410 variant alleles and maps to 430 oligo probes.

Gene

This transcript is a product of gene ENSG00000131149.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253458.7	GSE1-002	7495	1217aa	ENSP00000253458.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10952	C9JLW9 Q14687	NM_014615.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393243.1	GSE1-001	7140	1144aa	ENSP00000376934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62007	C9JLW9 Q14687	NM_001278184.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412692.1	GSE1-005	6625	986aa	ENSP00000402367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KXH7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000405402.2	GSE1-003	4366	1113aa	ENSP00000384839.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45539	C9JLW9 Q14687	NM_001134473.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438180.1	GSE1-011	1741	419aa	ENSP00000410812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000411612.1	GSE1-006	872	210aa	ENSP00000409006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLW9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471070.1	GSE1-010	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469381.1	GSE1-004	5885	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562659.1	GSE1-012	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479488.1	GSE1-007	649	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495192.1	GSE1-008	618	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496345.1	GSE1-009	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 5,885 bps,

Version

ENST00000469381.1

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000325529 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000469381.1 GSE1-004

Summary