Transcript: ENST00000253457.3 EMC8-001

Description

ER membrane protein complex subunit 8 [Source:HGNC Symbol;Acc:7864]

Gene Synonyms

C16orf2, C16orf4, COX4AL, COX4NB, FAM158B, NOC4

Location

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 12050 variant alleles and maps to 380 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253457.3	EMC8-001	1962	210aa	ENSP00000253457.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10954	M0R1B0 O43402 Q53Y03	NM_006067.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435200.2	EMC8-002	1935	126aa	ENSP00000391730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45541	O43402	NM_001142288.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595980.1	EMC8-003	556	100aa	ENSP00000471751.1	Nonsense mediated decay		M0R1B0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000597291.1	EMC8-005	1826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000600807.1	EMC8-004	851	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596852.1	EMC8-006	486	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,962 bps, Translation length: 210 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43402

CCDS

This transcript is a member of the Human CCDS set: CCDS10954

Version

ENST00000253457.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000269099 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.