Description
spectrin repeat containing, nuclear envelope 1 [Source:HGNC Symbol;Acc:17089]
Gene Synonyms
8B, ARCA1, C6orf98, CPG2, EDMD4, KIAA0796, KIAA1262, KIAA1756, MYNE1, Nesp1, Nesprin-1, SCAR8, SYNE-1B, dJ45H2.2, enaptin
Location
Chromosome 6: 152,756,526-152,949,466 reverse strand.
About this transcript
This transcript has 31 exons, is annotated with 29 domains and features, is associated with 83550 variant alleles and maps to 652 oligo probes.
Gene
This transcript is a product of gene ENSG00000131018.18 Show transcript tableHide transcript table
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000367255.5 | SYNE1-001 | 27748 | 8797aa | ENSP00000356224.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5236 | Q8NF91 | NM_182961.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000265368.4 | SYNE1-201 | 27745 | 8797aa | ENSP00000265368.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000448038.1 | SYNE1-204 | 27601 | 8749aa | ENSP00000390975.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PEL9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000423061.1 | SYNE1-002 | 27436 | 8749aa | ENSP00000396024.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5235 | Q8NF91 | NM_033071.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000341594.5 | SYNE1-202 | 26581 | 8409aa | ENSP00000341887.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ENN3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000356820.4 | SYNE1-203 | 10835 | 3321aa | ENSP00000349276.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000367248.3 | SYNE1-009 | 7165 | 1433aa | ENSP00000356217.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GXQ8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000367251.3 | SYNE1-006 | 5837 | 1654aa | ENSP00000356220.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0Y325 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000367253.4 | SYNE1-010 | 5189 | 1725aa | ENSP00000356222.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8NF91 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000367257.4 | SYNE1-033 | 5022 | 1355aa | ENSP00000356226.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z9Y6 H0Y326 Q5BKU8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000413186.2 | SYNE1-029 | 4860 | 1443aa | ENSP00000414510.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8NF91 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000539504.1 | SYNE1-005 | 3768 | 952aa | ENSP00000441052.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JV20 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000354674.4 | SYNE1-027 | 3154 | 975aa | ENSP00000346701.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8WAI0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000537750.1 | SYNE1-030 | 2850 | 615aa | ENSP00000441264.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GYQ7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000466159.2 | SYNE1-021 | 2610 | 754aa | ENSP00000446021.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H4Q0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000495090.2 | SYNE1-022 | 1907 | 612aa | ENSP00000438508.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H422 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000454018.2 | SYNE1-012 | 1548 | 511aa | ENSP00000390858.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3ZCV0 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000540663.1 | SYNE1-036 | 776 | 242aa | ENSP00000437411.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H6R8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000537033.1 | SYNE1-037 | 647 | 195aa | ENSP00000443879.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZ83 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000469439.1 | SYNE1-013 | 630 | 207aa | ENSP00000442805.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000474655.2 | SYNE1-023 | 1798 | 62aa | ENSP00000440193.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000347037.5 | SYNE1-004 | 3798 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000460912.2 | SYNE1-028 | 3664 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000536990.1 | SYNE1-034 | 3003 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000535896.2 | SYNE1-031 | 1388 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000481502.1 | SYNE1-020 | 585 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000476519.1 | SYNE1-025 | 582 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000498751.1 | SYNE1-024 | 578 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000367256.5 | SYNE1-011 | 10742 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000409694.2 | SYNE1-015 | 10634 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000461872.2 | SYNE1-014 | 10075 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000478916.1 | SYNE1-017 | 7780 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000471834.1 | SYNE1-018 | 7229 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000490135.2 | SYNE1-003 | 5707 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000489156.1 | SYNE1-016 | 1891 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000468937.2 | SYNE1-019 | 688 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000490866.2 | SYNE1-026 | 581 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000535081.1 | SYNE1-035 | 561 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000545694.1 | SYNE1-038 | 526 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000472563.2 | SYNE1-007 | 525 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000488376.2 | SYNE1-008 | 414 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |