Transcript: ENST00000491019.1 PNPLA7-005

Description

patatin-like phospholipase domain containing 7 [Source:HGNC Symbol;Acc:24768]

Gene Synonyms

C9orf111, FLJ31318, FLJ43070, FLJ44279, NTE-R1, NTEL1, RP11-48C7.2

Location

Chromosome 9: 140,417,189-140,441,826 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 11801 variant alleles and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSG00000130653.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000406427.1	PNPLA7-201	4806	1342aa	ENSP00000384610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48070	Q5T362 Q6ZV29	NM_001098537.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000277531.4	PNPLA7-007	4581	1317aa	ENSP00000277531.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7045	Q6ZV29	NM_152286.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434090.1	PNPLA7-004	3916	1281aa	ENSP00000400582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T362	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000371457.1	PNPLA7-001	3376	923aa	ENSP00000360512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491019.1	PNPLA7-005	874	200aa	ENSP00000436165.1	Nonsense mediated decay		F2Z2D4	-	-
ENST00000492278.1	PNPLA7-002	5308	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469998.1	PNPLA7-003	4150	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487228.1	PNPLA7-006	792	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 874 bps, Translation length: 200 residues

Version

ENST00000491019.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000055340 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000491019.1 PNPLA7-005

Summary