Transcript: ENST00000277531.4 PNPLA7-007

Description

patatin-like phospholipase domain containing 7 [Source:HGNC Symbol;Acc:24768]

Gene Synonyms

C9orf111, FLJ31318, FLJ43070, FLJ44279, NTE-R1, NTEL1, RP11-48C7.2

Location

Chromosome 9: 140,354,405-140,444,836 reverse strand.

About this transcript

This transcript has 34 exons, is annotated with 25 domains and features, is associated with 48433 variant alleles and maps to 977 oligo probes.

Gene

This transcript is a product of gene ENSG00000130653.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000406427.1	PNPLA7-201	4806	1342aa	ENSP00000384610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48070	Q5T362 Q6ZV29	NM_001098537.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000277531.4	PNPLA7-007	4581	1317aa	ENSP00000277531.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7045	Q6ZV29	NM_152286.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434090.1	PNPLA7-004	3916	1281aa	ENSP00000400582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T362	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000371457.1	PNPLA7-001	3376	923aa	ENSP00000360512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491019.1	PNPLA7-005	874	200aa	ENSP00000436165.1	Nonsense mediated decay		F2Z2D4	-	-
ENST00000492278.1	PNPLA7-002	5308	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469998.1	PNPLA7-003	4150	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487228.1	PNPLA7-006	792	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 34, Coding exons: 34, Transcript length: 4,581 bps, Translation length: 1,317 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZV29

CCDS

This transcript is a member of the Human CCDS set: CCDS7045

Version

ENST00000277531.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254787 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000277531.4 PNPLA7-007

Summary