Transcript: ENST00000252854.4 OLFM1-001

Description

olfactomedin 1 [Source:HGNC Symbol;Acc:17187]

Gene Synonyms

AMY, NOE1, NOEL1, NOELIN, NOELIN1, OlfA

Location

Chromosome 9: 137,967,366-138,013,024 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 22978 variant alleles and maps to 453 oligo probes.

Gene

This transcript is a product of gene ENSG00000130558.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000252854.4	OLFM1-001	2591	467aa	ENSP00000252854.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6986	B3KR22 F5GZQ2 F5H810 Q6IMJ8 Q96BL8 Q99784	NM_014279.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371796.3	OLFM1-003	2492	458aa	ENSP00000360861.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65183	B3KR22 F5GZQ2 F5H810 Q6IMJ5 Q96BL8	NM_001282612.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371793.3	OLFM1-004	2444	485aa	ENSP00000360858.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65184	B3KR22 F5GZQ2 F5H810 Q96BL8 Q99784	NM_001282611.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392991.4	OLFM1-009	1057	153aa	ENSP00000376717.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q99784	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000277415.11	OLFM1-002	1014	135aa	ENSP00000277415.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6987	Q6IMJ7 Q99784	NM_006334.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371799.4	OLFM1-006	961	167aa	ENSP00000360864.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6IMJ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539877.1	OLFM1-013	791	208aa	ENSP00000443806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H810	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000545657.1	OLFM1-012	727	99aa	ENSP00000437906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000371801.4	OLFM1-007	568	129aa	ENSP00000360866.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VZL8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539529.1	OLFM1-011	546	129aa	ENSP00000444296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZQ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000339720.6	OLFM1-010	542	163aa	ENSP00000340318.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W870	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000483042.1	OLFM1-005	2624	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,591 bps, Translation length: 467 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99784

CCDS

This transcript is a member of the Human CCDS set: CCDS6986

Version

ENST00000252854.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000054971 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000252854.4 OLFM1-001

Summary