Transcript: ENST00000531925.1 ATP8B3-003

Description

ATPase, aminophospholipid transporter, class I, type 8B, member 3 [Source:HGNC Symbol;Acc:13535]

Gene Synonyms

ATP1K, ATPIK, FOS37502_2

Location

Chromosome 19: 1,782,076-1,812,275 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 1 domain and feature, is associated with 17737 variant alleles and maps to 807 oligo probes.

Gene

This transcript is a product of gene ENSG00000130270.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000539485.1	ATP8B3-201	5118	1310aa	ENSP00000443574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O60423	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310127.6	ATP8B3-002	5095	1300aa	ENSP00000311336.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45901	O60423	NM_138813.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525591.1	ATP8B3-005	4014	1263aa	ENSP00000437115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54196	O60423	NM_001178002.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526092.2	ATP8B3-001	2740	562aa	ENSP00000445204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3R9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587160.2	ATP8B3-009	933	205aa	ENSP00000465027.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533993.2	ATP8B3-004	882	294aa	ENSP00000445883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000531925.1	ATP8B3-003	5237	86aa	ENSP00000444334.1	Nonsense mediated decay		F5GZM8	-	-
ENST00000526847.1	ATP8B3-008	887	38aa	ENSP00000439993.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000533107.1	ATP8B3-007	2187	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 3, Transcript length: 5,237 bps, Translation length: 86 residues

Version

ENST00000531925.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388280 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000531925.1 ATP8B3-003

Summary