Transcript: ENST00000417344.2 CCNT1-004

Description

cyclin T1 [Source:HGNC Symbol;Acc:1599]

Gene Synonyms

CCNT, CYCT1, HIVE1

Location

About this transcript

This transcript has 8 exons, is annotated with 6 domains and features, is associated with 11234 variant alleles and maps to 342 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261900.3	CCNT1-001	6973	726aa	ENSP00000261900.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8766	O60563	NM_001277842.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417344.2	CCNT1-004	2017	184aa	ENSP00000399845.2	Nonsense mediated decay	CCDS61109	A9XU13	-	-
ENST00000551989.1	CCNT1-003	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000550457.1	CCNT1-002	351	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,017 bps, Translation length: 184 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS61109

Version

ENST00000417344.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000408854 (version 1)