Transcript: ENST00000559696.1 MYO5C-009

Description

myosin VC [Source:HGNC Symbol;Acc:7604]

Gene Synonyms

MGC74969

Location

Chromosome 15: 52,497,245-52,505,725 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 3371 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSG00000128833.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261839.7	MYO5C-001	6971	1742aa	ENSP00000261839.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42036	H0YM93 Q14783 Q9NQX4	NM_018728.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443683.2	MYO5C-201	3074	373aa	ENSP00000410582.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PE01 Q14783	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558479.1	MYO5C-007	770	106aa	ENSP00000453514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YM93 Q14783	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560809.1	MYO5C-005	6076	269aa	ENSP00000453641.1	Nonsense mediated decay		H0YM93 H0YMK3 Q14783	-	-
ENST00000558902.1	MYO5C-002	3074	153aa	ENSP00000453517.1	Nonsense mediated decay		H0YM96	-	-
ENST00000559459.1	MYO5C-004	2129	430aa	ENSP00000454064.1	Nonsense mediated decay		H0YM93 Q14783 Q6P1W8	-	-
ENST00000541028.1	MYO5C-003	999	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559434.1	MYO5C-006	2517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559696.1	MYO5C-009	837	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558242.1	MYO5C-008	492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 837 bps,

Version

ENST00000559696.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000419564 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000559696.1 MYO5C-009

Summary