Transcript: ENST00000541194.1 PODXL-202

Description

podocalyxin-like [Source:HGNC Symbol;Acc:9171]

Gene Synonyms

Gp200, PC, PCLP, PCLP-1, PCLP1

Location

Chromosome 7: 131,185,023-131,241,376 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 13 domains and features, is associated with 25334 variant alleles and maps to 490 oligo probes.

Gene

This transcript is a product of gene ENSG00000128567.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541194.1	PODXL-202	5988	560aa	ENSP00000440518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GWY5	NM_001018111.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537928.1	PODXL-201	5886	526aa	ENSP00000442655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7A2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378555.3	PODXL-005	2105	558aa	ENSP00000367817.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34755	O00592	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322985.9	PODXL-001	2011	526aa	ENSP00000319782.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47714	O00592	NM_005397.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446198.1	PODXL-003	6170	324aa	ENSP00000390152.1	Nonsense mediated decay		G3V0E6	-	-
ENST00000465001.1	PODXL-010	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487965.1	PODXL-007	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484346.1	PODXL-009	797	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482581.1	PODXL-006	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490761.1	PODXL-008	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 5,988 bps, Translation length: 560 residues

Version

ENST00000541194.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000541194.1 PODXL-202

Summary