Transcript: ENST00000434438.2 HIP1-002

Description

huntingtin interacting protein 1 [Source:HGNC Symbol;Acc:4913]

Gene Synonyms

HIP-I, ILWEQ

Location

About this transcript

This transcript has 29 exons, is annotated with 19 domains and features, is associated with 90164 variant alleles and maps to 906 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336926.6	HIP1-001	8013	1037aa	ENSP00000336747.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34669	B4DK46 B4DYD7 O00291 Q8TDA4	NM_005338.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434438.2	HIP1-002	7066	986aa	ENSP00000410300.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59060	B4DK46 O00291 Q8TDA4	NM_001243198.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420909.1	HIP1-004	583	146aa	ENSP00000414280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMG5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000479835.1	HIP1-003	503	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485723.1	HIP1-007	419	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000404944.3	HIP1-005	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 7,066 bps, Translation length: 986 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00291

CCDS

This transcript is a member of the Human CCDS set: CCDS59060

Version

ENST00000434438.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000342864 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.