Transcript: ENST00000248054.5 SIN3B-001

Description

SIN3 transcription regulator family member B [Source:HGNC Symbol;Acc:19354]

Gene Synonyms

KIAA0700

Location

Chromosome 19: 16,940,211-16,991,161 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 20 domains and features, is associated with 24966 variant alleles and maps to 731 oligo probes.

Gene

This transcript is a product of gene ENSG00000127511.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379803.1	SIN3B-003	5129	1162aa	ENSP00000369131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32946	O75182	NM_015260.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000248054.5	SIN3B-001	5037	1130aa	ENSP00000248054.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75182	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595541.1	SIN3B-004	2767	720aa	ENSP00000469740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYC5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596802.1	SIN3B-002	2556	353aa	ENSP00000473039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75182	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596638.1	SIN3B-006	1104	309aa	ENSP00000472365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000594235.1	SIN3B-005	923	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000599880.1	SIN3B-007	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000595900.1	SIN3B-012	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000601141.1	SIN3B-011	1473	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000595049.1	SIN3B-010	904	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594372.1	SIN3B-008	875	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602204.1	SIN3B-009	517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 5,037 bps, Translation length: 1,130 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75182

Version

ENST00000248054.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000462846 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000248054.5 SIN3B-001

Summary