Transcript: ENST00000542394.1 HELB-002

Description

helicase (DNA) B [Source:HGNC Symbol;Acc:17196]

Gene Synonyms

hDHB

Location

About this transcript

This transcript has 13 exons, is annotated with 13 domains and features, is associated with 14708 variant alleles and maps to 472 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000247815.4	HELB-001	3420	1087aa	ENSP00000247815.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8976	Q8NG08	NM_033647.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545134.1	HELB-004	3586	1087aa	ENSP00000443287.1	Nonsense mediated decay	CCDS8976	Q8NG08	-	-
ENST00000542394.1	HELB-002	3432	846aa	ENSP00000439617.1	Nonsense mediated decay		F5H1I4	-	-
ENST00000440906.2	HELB-003	3167	574aa	ENSP00000396955.2	Nonsense mediated decay		Q8NG08	-	-
ENST00000545455.1	HELB-005	1013	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000536862.1	HELB-006	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 3,432 bps, Translation length: 846 residues

Version

ENST00000542394.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000401921 (version 1)