Transcript: ENST00000336066.3 PANK2-002

Description

pantothenate kinase 2 [Source:HGNC Symbol;Acc:15894]

Gene Synonyms

C20orf48, FLJ11729, HARP, HSS, NBIA1, PKAN

Location

Chromosome 20: 3,870,036-3,904,502 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 17939 variant alleles and maps to 294 oligo probes.

Gene

This transcript is a product of gene ENSG00000125779.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000497424.1	PANK2-001	4815	279aa	ENSP00000417609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13072	A4FU43 D3DVZ1 Q52M85 Q9BZ23	NM_153640.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000316562.4	PANK2-007	2280	570aa	ENSP00000313377.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13071	A4FU43 D3DVZ1 Q52M85 Q9BZ23	NM_153638.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000610179.1	PANK2-008	1807	447aa	ENSP00000477429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A4FU43 D3DVZ1 Q52M85	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495692.1	PANK2-003	967	115aa	ENSP00000476745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000336066.3	PANK2-002	1843	158aa	ENSP00000477229.1	Nonsense mediated decay		-	-	-
ENST00000464452.1	PANK2-005	771	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471830.1	PANK2-004	622	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,843 bps, Translation length: 158 residues

Version

ENST00000336066.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000077788 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000336066.3 PANK2-002

Summary