Transcript: ENST00000308482.9 LRRFIP1-002

Description

leucine rich repeat (in FLII) interacting protein 1 [Source:HGNC Symbol;Acc:6702]

Gene Synonyms

FLAP-1, FLAP1, FLIIAP1, GCF-2, GCF2, HUFI-1, TRIP, tmp_locus_7

Location

Chromosome 2: 238,536,219-238,688,958 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 17 domains and features, is associated with 65970 variant alleles and maps to 1043 oligo probes.

Gene

This transcript is a product of gene ENSG00000124831.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000244815.5	LRRFIP1-001	4370	784aa	ENSP00000244815.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2521	Q32MZ4	NM_004735.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000289175.6	LRRFIP1-004	3709	752aa	ENSP00000289175.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46553	Q32MZ4	NM_001137553.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392000.4	LRRFIP1-003	3365	808aa	ENSP00000375857.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46552	Q32MZ4	NM_001137552.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000308482.9	LRRFIP1-002	2775	640aa	ENSP00000310109.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46551	Q32MZ4 Q9BSL6	NM_001137550.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420665.1	LRRFIP1-005	570	149aa	ENSP00000409431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000468950.1	LRRFIP1-009	815	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498053.1	LRRFIP1-012	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489603.1	LRRFIP1-016	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473815.1	LRRFIP1-007	476	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489295.1	LRRFIP1-013	364	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478958.1	LRRFIP1-008	2869	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474195.1	LRRFIP1-010	1957	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465870.1	LRRFIP1-011	1626	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483443.1	LRRFIP1-014	1069	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464608.1	LRRFIP1-015	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 2,775 bps, Translation length: 640 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q32MZ4

CCDS

This transcript is a member of the Human CCDS set: CCDS46551

Version

ENST00000308482.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257169 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000308482.9 LRRFIP1-002

Summary