Transcript: ENST00000462850.1 USP9X-009

Description

ubiquitin specific peptidase 9, X-linked [Source:HGNC Symbol;Acc:12632]

Gene Synonyms

DFFRX, FAF, FAM, RP5-1172N10.4, USP9

Location

Chromosome X: 41,055,158-41,057,824 forward strand.

About this transcript

This transcript has 5 exons, is associated with 906 variant alleles and maps to 112 oligo probes.

Gene

This transcript is a product of gene ENSG00000124486.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000324545.8	USP9X-003	12401	2570aa	ENSP00000316357.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43930	Q93008	NM_001039591.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378308.2	USP9X-001	8371	2554aa	ENSP00000367558.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55403	D3DWB6 Q86X58 Q93008	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462850.1	USP9X-009	548	46aa	ENSP00000420570.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000485180.1	USP9X-010	757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467173.1	USP9X-002	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463829.1	USP9X-007	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487625.1	USP9X-004	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465386.1	USP9X-008	479	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 548 bps, Translation length: 46 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000462850.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000356682 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000462850.1 USP9X-009

Summary