Transcript: ENST00000324545.8 USP9X-003

Description

ubiquitin specific peptidase 9, X-linked [Source:HGNC Symbol;Acc:12632]

Gene Synonyms

DFFRX, FAF, FAM, RP5-1172N10.4, USP9

Location

Chromosome X: 40,944,888-41,095,832 forward strand.

About this transcript

This transcript has 45 exons, is annotated with 24 domains and features, is associated with 49346 variant alleles and maps to 1378 oligo probes.

Gene

This transcript is a product of gene ENSG00000124486.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000324545.8	USP9X-003	12401	2570aa	ENSP00000316357.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43930	Q93008	NM_001039591.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378308.2	USP9X-001	8371	2554aa	ENSP00000367558.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55403	D3DWB6 Q86X58 Q93008	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462850.1	USP9X-009	548	46aa	ENSP00000420570.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000485180.1	USP9X-010	757	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467173.1	USP9X-002	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463829.1	USP9X-007	666	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487625.1	USP9X-004	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465386.1	USP9X-008	479	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 45, Coding exons: 44, Transcript length: 12,401 bps, Translation length: 2,570 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q93008

CCDS

This transcript is a member of the Human CCDS set: CCDS43930

Version

ENST00000324545.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000056250 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000324545.8 USP9X-003

Summary