Transcript: ENST00000395819.3 PMEPA1-004

Description

prostate transmembrane protein, androgen induced 1 [Source:HGNC Symbol;Acc:14107]

Gene Synonyms

STAG1, TMEPAI

Location

Chromosome 20: 56,227,463-56,284,816 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 26826 variant alleles and maps to 293 oligo probes.

Gene

This transcript is a product of gene ENSG00000124225.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341744.3	PMEPA1-001	4845	287aa	ENSP00000345826.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13463	Q969W9	NM_020182.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265626.4	PMEPA1-201	4572	237aa	ENSP00000265626.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13464	Q969W9	NM_199171.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347215.4	PMEPA1-002	4546	252aa	ENSP00000344014.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13462	Q5JY37 Q969W9	NM_199170.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395816.3	PMEPA1-007	4519	237aa	ENSP00000379161.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13464	Q969W9	NM_001255976.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395819.3	PMEPA1-004	859	227aa	ENSP00000379164.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2F5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414037.1	PMEPA1-005	831	208aa	ENSP00000401506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2F4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000395814.1	PMEPA1-006	800	237aa	ENSP00000379159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13464	Q969W9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472841.1	PMEPA1-003	361	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 859 bps, Translation length: 227 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000395819.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000267812 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000395819.3 PMEPA1-004

Summary