Transcript: ENST00000395816.3 PMEPA1-007

Description

prostate transmembrane protein, androgen induced 1 [Source:HGNC Symbol;Acc:14107]

Gene Synonyms

STAG1, TMEPAI

Location

Chromosome 20: 56,223,448-56,285,625 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 29515 variant alleles and maps to 542 oligo probes.

Gene

This transcript is a product of gene ENSG00000124225.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341744.3	PMEPA1-001	4845	287aa	ENSP00000345826.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13463	Q969W9	NM_020182.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265626.4	PMEPA1-201	4572	237aa	ENSP00000265626.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13464	Q969W9	NM_199171.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000347215.4	PMEPA1-002	4546	252aa	ENSP00000344014.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13462	Q5JY37 Q969W9	NM_199170.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395816.3	PMEPA1-007	4519	237aa	ENSP00000379161.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13464	Q969W9	NM_001255976.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395819.3	PMEPA1-004	859	227aa	ENSP00000379164.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2F5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414037.1	PMEPA1-005	831	208aa	ENSP00000401506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2F4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000395814.1	PMEPA1-006	800	237aa	ENSP00000379159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13464	Q969W9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472841.1	PMEPA1-003	361	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 4,519 bps, Translation length: 237 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q969W9

CCDS

This transcript is a member of the Human CCDS set: CCDS13464

Version

ENST00000395816.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000267815 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000395816.3 PMEPA1-007

Summary