Transcript: ENST00000463370.1 VAPB-003

Description

VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:HGNC Symbol;Acc:12649]

Gene Synonyms

ALS8, VAMP-B, VAP-B, VAP-C

Location

About this transcript

This transcript has 6 exons, is associated with 6322 variant alleles and maps to 360 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000475243.1	VAPB-001	7936	243aa	ENSP00000417175.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33498	B3KVU7 O95292 Q53XM7	NM_004738.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395802.3	VAPB-002	1834	99aa	ENSP00000379147.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56198	O95292 Q59EZ6	NM_001195677.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520497.1	VAPB-006	937	71aa	ENSP00000430426.1	Nonsense mediated decay		E5RK64	-	-
ENST00000265619.2	VAPB-004	3596	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463370.1	VAPB-003	2393	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476395.1	VAPB-005	3583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 2,393 bps,

Version

ENST00000463370.1

Type

Processed transcript

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000267818 (version 1)