Transcript: ENST00000556356.1 LRP1-007

Description

low density lipoprotein receptor-related protein 1 [Source:HGNC Symbol;Acc:6692]

Gene Synonyms

A2MR, APOER, APR, CD91, IGFBP3R, LRP, LRP1A, TGFBR5

Location

Chromosome 12: 57,597,401-57,607,123 forward strand.

About this transcript

This transcript has 17 exons, is associated with 5073 variant alleles and maps to 661 oligo probes.

Gene

This transcript is a product of gene ENSG00000123384.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000243077.3	LRP1-001	14897	4544aa	ENSP00000243077.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8932	Q07954 Q6LAF4 Q6LBN5	NM_002332.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554174.1	LRP1-004	2175	439aa	ENSP00000451737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6PJ72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338962.4	LRP1-003	2169	292aa	ENSP00000341264.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86SW0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553277.1	LRP1-002	1693	296aa	ENSP00000451449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z7K9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555124.1	LRP1-009	550	183aa	ENSP00000451012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJ88	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000554118.1	LRP1-012	418	139aa	ENSP00000451622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000553446.1	LRP1-006	292	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556356.1	LRP1-007	5114	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556830.1	LRP1-005	1847	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000451724.2	LRP1-010	1284	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556247.1	LRP1-011	611	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555941.1	LRP1-008	499	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 0, Transcript length: 5,114 bps,

Version

ENST00000556356.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412777 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000556356.1 LRP1-007

Summary