Transcript: ENST00000546713.1 HVCN1-006

Description

hydrogen voltage-gated channel 1 [Source:HGNC Symbol;Acc:28240]

Gene Synonyms

HV1, Hv1, MGC15619, VSOP

Location

Chromosome 12: 111,099,040-111,142,755 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 17375 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSG00000122986.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356742.5	HVCN1-001	2189	273aa	ENSP00000349181.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31900	F8VPF7 F8W0B3 Q96D96	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000242607.8	HVCN1-003	1634	273aa	ENSP00000242607.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31900	F8VPF7 F8W0B3 Q96D96	NM_032369.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548312.1	HVCN1-002	1301	255aa	ENSP00000449601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VPF7 F8W0B3 Q96D96	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439744.2	HVCN1-004	1215	253aa	ENSP00000412052.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58278	Q96D96	NM_001256413.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549442.1	HVCN1-007	829	214aa	ENSP00000450106.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VPF7 F8W0B3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000546713.1	HVCN1-006	539	78aa	ENSP00000447227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W0B3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547887.1	HVCN1-008	441	79aa	ENSP00000448379.1	Nonsense mediated decay		F8VS40	-	-
ENST00000546425.1	HVCN1-005	788	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 539 bps, Translation length: 78 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000546713.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000404657 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000546713.1 HVCN1-006

Summary