Transcript: ENST00000550748.1 IFT81-007

Description

intraflagellar transport 81 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:14313]

Gene Synonyms

CDV-1, CDV-1R, CDV1, CDV1R, DV1, MGC4027

Location

Chromosome 12: 110,641,140-110,656,365 forward strand.

About this transcript

This transcript has 4 exons, is associated with 5959 variant alleles and maps to 238 oligo probes.

Gene

This transcript is a product of gene ENSG00000122970.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000242591.5	IFT81-003	3108	676aa	ENSP00000242591.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41831	Q8WYA0	NM_014055.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361948.4	IFT81-001	3048	431aa	ENSP00000355372.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9142	Q8WYA0	NM_031473.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552912.1	IFT81-002	2710	676aa	ENSP00000449718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41831	Q8WYA0	NM_001143779.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546374.1	IFT81-004	1171	366aa	ENSP00000446950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1J4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000550156.1	IFT81-008	2694	624aa	ENSP00000446895.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551273.1	IFT81-005	549	104aa	ENSP00000449964.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000549009.1	IFT81-009	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000551055.1	IFT81-006	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000550748.1	IFT81-007	2829	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,829 bps,

Version

ENST00000550748.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403535 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000550748.1 IFT81-007

Summary