Transcript: ENST00000261833.7 CIT-001

Description

citron (rho-interacting, serine/threonine kinase 21) [Source:HGNC Symbol;Acc:1985]

Gene Synonyms

CRIK, KIAA0949, MIRN1178, STK21, hsa-mir-1178

Location

Chromosome 12: 120,123,596-120,315,092 reverse strand.

About this transcript

This transcript has 47 exons, is annotated with 45 domains and features, is associated with 79012 variant alleles and maps to 1036 oligo probes.

Gene

This transcript is a product of gene ENSG00000122966.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392521.2	CIT-005	8708	2069aa	ENSP00000376306.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55891	O14578	NM_001206999.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261833.7	CIT-001	8578	2027aa	ENSP00000261833.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9192	O14578	NM_007174.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392520.2	CIT-006	5205	1640aa	ENSP00000376305.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000546026.1	CIT-011	677	162aa	ENSP00000446105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4K4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536325.1	CIT-008	329	109aa	ENSP00000443199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YGG8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000537607.1	CIT-007	4958	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000539413.1	CIT-009	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000543324.1	CIT-017	497	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469414.1	CIT-004	441	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545913.1	CIT-003	8520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488203.1	CIT-002	2283	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544588.1	CIT-012	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000541841.1	CIT-010	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543239.1	CIT-013	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000536008.1	CIT-014	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544800.1	CIT-015	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000538073.1	CIT-016	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544872.1	CIT-018	524	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 47, Coding exons: 46, Transcript length: 8,578 bps, Translation length: 2,027 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14578

CCDS

This transcript is a member of the Human CCDS set: CCDS9192

Version

ENST00000261833.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000259410 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000261833.7 CIT-001

Summary