Transcript: ENST00000405863.1 NXPH1-001

Description

neurexophilin 1 [Source:HGNC Symbol;Acc:20693]

Gene Synonyms

NPH1

Location

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 162874 variant alleles and maps to 340 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000405863.1	NXPH1-001	2921	271aa	ENSP00000384551.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47540	B4DJV1 C9JE46 C9JPD0 P58417 Q3LID8	NM_152745.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602349.1	NXPH1-201	1287	154aa	ENSP00000473269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJV1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429542.1	NXPH1-004	949	143aa	ENSP00000408216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE46 C9JPD0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000438764.1	NXPH1-003	568	139aa	ENSP00000404689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE46	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497400.1	NXPH1-002	1039	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,921 bps, Translation length: 271 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P58417

CCDS

This transcript is a member of the Human CCDS set: CCDS47540

Version

ENST00000405863.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000324591 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.