Transcript: ENST00000425198.1 SEPT7-003

Description

septin 7 [Source:HGNC Symbol;Acc:1717]

Gene Synonyms

CDC10, CDC3, NBLA02942, SEPT7A

Location

Chromosome 7: 35,872,408-35,944,915 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 30620 variant alleles and maps to 918 oligo probes.

Gene

This transcript is a product of gene ENSG00000122545.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000494488.2	SEPT7-206	6976	381aa	ENSP00000438395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0Y3Y4 H0YFF6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435235.1	SEPT7-001	2601	384aa	ENSP00000413507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V1Q4 Q5JXL7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399034.2	SEPT7-202	2522	438aa	ENSP00000381992.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V1Q4 Q16181 Q5JXL7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350320.6	SEPT7-201	2516	436aa	ENSP00000344868.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EPK1 G3V1Q4 Q5JXL7	NM_001788.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399035.3	SEPT7-203	2323	436aa	ENSP00000381993.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7ES33 G3V1Q4 Q5JXL7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432293.2	SEPT7-204	1362	88aa	ENSP00000444240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5JXL7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469679.2	SEPT7-205	898	235aa	ENSP00000444501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5GZE5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425198.1	SEPT7-003	6952	373aa	ENSP00000387913.1	Nonsense mediated decay	H0Y3Y4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000475109.1	SEPT7-007	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000493626.1	SEPT7-002	643	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000485569.1	SEPT7-010	333	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000473201.1	SEPT7-006	686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000492940.1	SEPT7-009	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 6,952 bps, Translation length: 373 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000425198.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000338287 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000425198.1 SEPT7-003

Summary