Transcript: ENST00000567686.1 RBBP6-007

Description

retinoblastoma binding protein 6 [Source:HGNC Symbol;Acc:9889]

Gene Synonyms

MY038, P2P-R, P2PR, PACT, RBQ-1, RBQ1, SNAMA

Location

Chromosome 16: 24,549,033-24,572,986 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 16 domains and features, is associated with 11098 variant alleles and maps to 307 oligo probes.

Gene

This transcript is a product of gene ENSG00000122257.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000319715.4	RBBP6-001	6229	1792aa	ENSP00000317872.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10621	H3BSK8 H3BUN0 I3L3Y2 Q7Z6E9	NM_006910.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000348022.2	RBBP6-002	5739	1758aa	ENSP00000316291.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10622	H3BUN0 I3L3Y2 Q7Z6E9	NM_018703.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381039.3	RBBP6-005	3384	952aa	ENSP00000370427.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BUN0 I3L3Y2 Q7Z6E9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564314.1	RBBP6-006	3361	1008aa	ENSP00000456750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BSK8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567686.1	RBBP6-007	1138	300aa	ENSP00000457716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BUN0 I3L3Y2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000452655.2	RBBP6-003	854	118aa	ENSP00000390537.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45444	Q7Z6E9	NM_032626.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568015.1	RBBP6-009	695	158aa	ENSP00000460821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3Y2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562430.1	RBBP6-004	6482	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568316.1	RBBP6-012	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562683.1	RBBP6-010	529	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564726.1	RBBP6-008	514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570185.1	RBBP6-011	505	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,138 bps, Translation length: 300 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000567686.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000435954 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000567686.1 RBBP6-007

Summary