Transcript: ENST00000472804.1 TNFSF10-005

Description

tumor necrosis factor (ligand) superfamily, member 10 [Source:HGNC Symbol;Acc:11925]

Gene Synonyms

APO2L, Apo-2L, CD253, TL2, TRAIL

Location

About this transcript

This transcript has 3 exons, is associated with 5183 variant alleles and maps to 167 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000241261.2	TNFSF10-001	1953	281aa	ENSP00000241261.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3219	P50591 Q6IBA9	NM_003810.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420541.2	TNFSF10-002	1619	101aa	ENSP00000389931.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54680	P50591 Q6JSD9	NM_001190942.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430881.1	TNFSF10-007	467	74aa	ENSP00000404008.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000466777.1	TNFSF10-004	1326	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494851.1	TNFSF10-006	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472804.1	TNFSF10-005	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 566 bps,

Version

ENST00000472804.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346605 (version 1)