Transcript: ENST00000413146.2 TNFRSF8-002

Description

tumor necrosis factor receptor superfamily, member 8 [Source:HGNC Symbol;Acc:11923]

Gene Synonyms

CD30, D1S166E, KI-1, Ki-1

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 8387 variant alleles and maps to 281 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263932.2	TNFRSF8-001	3686	595aa	ENSP00000263932.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS144	A5D8T4	NM_001243.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417814.2	TNFRSF8-201	2412	483aa	ENSP00000390650.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59989	D3YTD8	NM_001281430.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413146.2	TNFRSF8-002	2363	132aa	ENSP00000398337.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P28908	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514649.1	TNFRSF8-003	2412	55aa	ENSP00000421938.1	Nonsense mediated decay		D6RAG8	-	-
ENST00000479933.2	TNFRSF8-004	2120	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 2,363 bps, Translation length: 132 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P28908

Version

ENST00000413146.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000005131 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.