Transcript: ENST00000379881.3 SOHLH2-001

Description

spermatogenesis and oogenesis specific basic helix-loop-helix 2 [Source:HGNC Symbol;Acc:26026]

Gene Synonyms

C13orf38-SOHLH2, FLJ20449, SPATA28, TEB1, bHLHe81

Location

About this transcript

This transcript has 11 exons, is annotated with 7 domains and features, is associated with 18858 variant alleles and maps to 378 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379881.3	SOHLH2-001	2193	425aa	ENSP00000369210.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9355	Q9NX45	NM_017826.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554962.1	SOHLH2-201	2051	502aa	ENSP00000451542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55896	Q9NX45	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000317764.6	SOHLH2-002	1909	225aa	ENSP00000326838.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61309	Q9NX45	NM_001282147.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,193 bps, Translation length: 425 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NX45

CCDS

This transcript is a member of the Human CCDS set: CCDS9355

Version

ENST00000379881.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044477 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.