Transcript: ENST00000540907.1 IQSEC3-003

Description

IQ motif and Sec7 domain 3 [Source:HGNC Symbol;Acc:29193]

Gene Synonyms

KIAA1110, MGC30156

Location

About this transcript

This transcript has 3 exons, is associated with 1128 variant alleles and maps to 97 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000538872.1	IQSEC3-002	7094	1182aa	ENSP00000437554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53728	Q9UPP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326261.4	IQSEC3-201	6863	1182aa	ENSP00000315662.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53728	Q9UPP2	NM_001170738.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382841.2	IQSEC3-001	2701	759aa	ENSP00000372292.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31725	Q9UPP2	NM_015232.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537151.1	IQSEC3-006	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000544511.1	IQSEC3-005	526	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000540907.1	IQSEC3-003	398	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 398 bps,

Version

ENST00000540907.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000397384 (version 1)