Transcript: ENST00000538872.1 IQSEC3-002

Description

IQ motif and Sec7 domain 3 [Source:HGNC Symbol;Acc:29193]

Gene Synonyms

KIAA1110, MGC30156

Location

About this transcript

This transcript has 14 exons, is annotated with 26 domains and features, is associated with 52733 variant alleles and maps to 816 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000538872.1	IQSEC3-002	7094	1182aa	ENSP00000437554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53728	Q9UPP2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326261.4	IQSEC3-201	6863	1182aa	ENSP00000315662.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53728	Q9UPP2	NM_001170738.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382841.2	IQSEC3-001	2701	759aa	ENSP00000372292.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31725	Q9UPP2	NM_015232.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537151.1	IQSEC3-006	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000544511.1	IQSEC3-005	526	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000540907.1	IQSEC3-003	398	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 7,094 bps, Translation length: 1,182 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UPP2

CCDS

This transcript is a member of the Human CCDS set: CCDS53728

Version

ENST00000538872.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000397382 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.