Transcript: ENST00000380746.4 DNMT3A-002

Description

DNA (cytosine-5-)-methyltransferase 3 alpha [Source:HGNC Symbol;Acc:2978]

Gene Synonyms

DNMT3A2, M.HsaIIIA

Location

Chromosome 2: 25,455,845-25,475,180 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 16 domains and features, is associated with 7598 variant alleles and maps to 713 oligo probes.

Gene

This transcript is a product of gene ENSG00000119772.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264709.3	DNMT3A-001	4380	912aa	ENSP00000264709.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33157	Q6PJ37 Q8WVA9 Q9Y6K1	NM_175629.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000321117.5	DNMT3A-011	4279	912aa	ENSP00000324375.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33157	Q6PJ37 Q8WVA9 Q9Y6K1	NM_022552.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380746.4	DNMT3A-002	3589	723aa	ENSP00000370122.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1718	Q6PJ37 Q8WVA9 Q9Y6K1	NM_153759.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402667.1	DNMT3A-013	2300	689aa	ENSP00000384237.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6PJ37 Q8WVA9 Q9Y6K1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406659.3	DNMT3A-012	1775	166aa	ENSP00000384852.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46232	Q9Y6K1	NM_175630.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380756.3	DNMT3A-010	4477	781aa	ENSP00000370132.3	Nonsense mediated decay		F8WE91 Q59HC6	-	-
ENST00000474887.1	DNMT3A-008	847	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496570.1	DNMT3A-017	656	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470983.1	DNMT3A-003	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461228.1	DNMT3A-006	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482935.1	DNMT3A-015	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491288.1	DNMT3A-009	472	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474807.1	DNMT3A-004	840	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466601.1	DNMT3A-007	812	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484184.1	DNMT3A-005	619	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,589 bps, Translation length: 723 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6K1

CCDS

This transcript is a member of the Human CCDS set: CCDS1718

Version

ENST00000380746.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000211588 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000380746.4 DNMT3A-002

Summary