Transcript: ENST00000553939.1 LTBP2-002

Description

latent transforming growth factor beta binding protein 2 [Source:HGNC Symbol;Acc:6715]

Gene Synonyms

C14orf141, GLC3D, LTBP3, MSPKA, MSTP031, WMS3

Location

Chromosome 14: 74,967,114-75,079,081 reverse strand.

About this transcript

This transcript has 36 exons, is annotated with 152 domains and features, is associated with 48404 variant alleles and maps to 852 oligo probes.

Gene

This transcript is a product of gene ENSG00000119681.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261978.4	LTBP2-001	8567	1821aa	ENSP00000261978.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9831	G3V254 Q14767	NM_000428.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556690.1	LTBP2-003	5614	1777aa	ENSP00000451477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V254 G3V3X5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556206.1	LTBP2-007	699	233aa	ENSP00000450668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000556359.1	LTBP2-004	582	68aa	ENSP00000450471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V254	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553939.1	LTBP2-002	6462	1769aa	ENSP00000452110.1	Nonsense mediated decay		G3V254 G3V511	-	-
ENST00000557425.1	LTBP2-005	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554861.1	LTBP2-006	863	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 36, Coding exons: 35, Transcript length: 6,462 bps, Translation length: 1,769 residues

Version

ENST00000553939.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000413596 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000553939.1 LTBP2-002

Summary