Transcript: ENST00000264020.2 IFT46-013

Description

intraflagellar transport 46 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:26146]

Gene Synonyms

C11orf2, C11orf60, FLJ21827

Location

Chromosome 11: 118,415,258-118,436,750 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 5 domains and features, is associated with 9317 variant alleles and maps to 424 oligo probes.

Gene

This transcript is a product of gene ENSG00000118096.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264020.2	IFT46-013	1819	355aa	ENSP00000264020.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8399	E9PMR8 Q9NQC8	NM_020153.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000264021.3	IFT46-001	1722	304aa	ENSP00000264021.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53718	E9PIM8 E9PKW0 E9PRT0 E9PSB9 Q9NQC8	NM_001168618.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530872.1	IFT46-002	1566	297aa	ENSP00000432384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMR8 E9PR06	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531939.1	IFT46-009	1182	196aa	ENSP00000435826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIM8 E9PKW0 E9PRT0 E9PSB9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528378.1	IFT46-008	830	107aa	ENSP00000435278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIM8 E9PKW0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534156.1	IFT46-006	776	194aa	ENSP00000434175.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIM8 E9PKW0 E9PRT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534114.1	IFT46-007	774	159aa	ENSP00000432982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMR8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533918.1	IFT46-004	553	61aa	ENSP00000435750.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIM8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527868.1	IFT46-003	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531201.1	IFT46-010	1496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525060.1	IFT46-011	821	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530185.1	IFT46-005	481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 1,819 bps, Translation length: 355 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQC8

CCDS

This transcript is a member of the Human CCDS set: CCDS8399

Version

ENST00000264020.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000389628 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000264020.2 IFT46-013

Summary