Transcript: ENST00000531904.2 KMT2A-002

Description

lysine (K)-specific methyltransferase 2A [Source:HGNC Symbol;Acc:7132]

Gene Synonyms

ALL-1, ALL1, CXXC7, HRX, HTRX, HTRX1, MLL, MLL/GAS7, MLL1, MLL1A, TET1-MLL, TRX1, WDSTS

Location

Chromosome 11: 118,307,225-118,355,029 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 23 domains and features, is associated with 20843 variant alleles and maps to 567 oligo probes.

Gene

This transcript is a product of gene ENSG00000118058.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000534358.1	KMT2A-001	16594	3972aa	ENSP00000436786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55791	B4DIJ7 Q03164 Q9HBJ4 Q9UM91 Q9UPD0	NM_005933.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000354520.4	KMT2A-201	14320	3931aa	ENSP00000346516.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DIJ7 H7BYJ6 Q03164 Q9UPD0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000389506.5	KMT2A-015	13655	3969aa	ENSP00000374157.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31686	B4DIJ7 Q03164 Q9HBJ4 Q9UM91 Q9UPD0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000531904.2	KMT2A-002	4320	1439aa	ENSP00000432391.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PR05 Q9Y6P1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529852.1	KMT2A-006	3323	87aa	ENSP00000436564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YEU4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000392873.3	KMT2A-017	1098	366aa	ENSP00000376612.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BYJ6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000533790.1	KMT2A-007	804	268aa	ENSP00000436700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C5W4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000532204.1	KMT2A-010	499	87aa	ENSP00000434618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YEU4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000527869.2	KMT2A-016	481	160aa	ENSP00000432652.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C5V8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000420751.2	KMT2A-004	254	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527839.1	KMT2A-013	2096	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528278.1	KMT2A-005	1799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525408.1	KMT2A-014	853	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534678.2	KMT2A-008	605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534085.1	KMT2A-009	323	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,320 bps, Translation length: 1,439 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000531904.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389229 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000531904.2 KMT2A-002

Summary