Transcript: ENST00000536929.1 STAG1-202

Description

stromal antigen 1 [Source:HGNC Symbol;Acc:11354]

Gene Synonyms

SA-1, SA1, SCC3A

Location

Chromosome 3: 136,056,822-136,192,445 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 5 domains and features, is associated with 65459 variant alleles and maps to 518 oligo probes.

Gene

This transcript is a product of gene ENSG00000118007.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000383202.2	STAG1-001	6053	1258aa	ENSP00000372689.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3090	Q4LE48 Q8WVM7	NM_005862.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000236698.5	STAG1-002	5951	1221aa	ENSP00000236698.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P275	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434713.2	STAG1-201	5204	998aa	ENSP00000404396.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DW7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536929.1	STAG1-202	2883	842aa	ENSP00000445787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1C4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480733.1	STAG1-005	1304	232aa	ENSP00000420789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJQ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492318.1	STAG1-006	570	190aa	ENSP00000419317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000483235.1	STAG1-003	5206	101aa	ENSP00000419093.1	Nonsense mediated decay		F8WF82	-	-
ENST00000487065.1	STAG1-004	2914	161aa	ENSP00000418472.1	Nonsense mediated decay		F8WCB3	-	-
ENST00000462818.1	STAG1-008	1227	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465961.1	STAG1-007	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 2,883 bps, Translation length: 842 residues

Version

ENST00000536929.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000536929.1 STAG1-202

Summary