Transcript: ENST00000426398.2 PTBP2-002

Description

polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:17662]

Gene Synonyms

NPTB, PTB, PTBLP, brPTB, nPTB, nPTB5, nPTB6, nPTB7, nPTB8

Location

Chromosome 1: 97,187,378-97,280,349 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 27 domains and features, is associated with 44846 variant alleles and maps to 525 oligo probes.

Gene

This transcript is a product of gene ENSG00000117569.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000609116.1	PTBP2-001	12014	532aa	ENSP00000477024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSI2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370197.1	PTBP2-004	3057	537aa	ENSP00000359216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSI2 O95652 Q9UKA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370198.1	PTBP2-003	3054	536aa	ENSP00000359217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O95652 Q9UKA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426398.2	PTBP2-002	3027	531aa	ENSP00000412788.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS754	Q9UKA9	NM_021190.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394184.3	PTBP2-201	1965	548aa	ENSP00000377738.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DSI2 B4DSS8 O95652	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541987.1	PTBP2-202	1700	325aa	ENSP00000442475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DI28	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482253.1	PTBP2-005	2029	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476419.1	PTBP2-008	1691	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460706.1	PTBP2-009	1129	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459735.1	PTBP2-010	791	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476783.1	PTBP2-006	779	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492905.1	PTBP2-007	776	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462433.1	PTBP2-011	365	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,027 bps, Translation length: 531 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UKA9

CCDS

This transcript is a member of the Human CCDS set: CCDS754

Version

ENST00000426398.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000029453 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000426398.2 PTBP2-002

Summary