Transcript: ENST00000489057.1 MEF2D-006

Description

myocyte enhancer factor 2D [Source:HGNC Symbol;Acc:6997]

Location

Chromosome 1: 156,453,053-156,470,571 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 7898 variant alleles and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSG00000116604.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000348159.4	MEF2D-001	5965	521aa	ENSP00000271555.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1143	Q14814	NM_005920.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340875.5	MEF2D-201	5868	520aa	ENSP00000343159.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14814	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368240.2	MEF2D-203	5850	514aa	ENSP00000357223.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60304	Q14814	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353795.3	MEF2D-202	5733	475aa	ENSP00000344705.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14814	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464356.2	MEF2D-005	5598	513aa	ENSP00000476788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T9U4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360595.3	MEF2D-004	3194	514aa	ENSP00000353803.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60304	Q14814	NM_001271629.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489057.1	MEF2D-006	593	10aa	ENSP00000477124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475587.2	MEF2D-002	1627	139aa	ENSP00000477413.1	Nonsense mediated decay		Q05BX2	-	-
ENST00000493077.1	MEF2D-007	526	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 593 bps, Translation length: 10 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000489057.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000080656 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000489057.1 MEF2D-006

Summary