Transcript: ENST00000348159.4 MEF2D-001

Description

myocyte enhancer factor 2D [Source:HGNC Symbol;Acc:6997]

Location

Chromosome 1: 156,433,519-156,470,620 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 15 domains and features, is associated with 17085 variant alleles and maps to 702 oligo probes.

Gene

This transcript is a product of gene ENSG00000116604.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000348159.4	MEF2D-001	5965	521aa	ENSP00000271555.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1143	Q14814	NM_005920.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340875.5	MEF2D-201	5868	520aa	ENSP00000343159.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14814	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368240.2	MEF2D-203	5850	514aa	ENSP00000357223.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60304	Q14814	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000353795.3	MEF2D-202	5733	475aa	ENSP00000344705.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q14814	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464356.2	MEF2D-005	5598	513aa	ENSP00000476788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T9U4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360595.3	MEF2D-004	3194	514aa	ENSP00000353803.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60304	Q14814	NM_001271629.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489057.1	MEF2D-006	593	10aa	ENSP00000477124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475587.2	MEF2D-002	1627	139aa	ENSP00000477413.1	Nonsense mediated decay		Q05BX2	-	-
ENST00000493077.1	MEF2D-007	526	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 5,965 bps, Translation length: 521 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14814

CCDS

This transcript is a member of the Human CCDS set: CCDS1143

Version

ENST00000348159.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000080562 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000348159.4 MEF2D-001

Summary