Transcript: ENST00000359761.3 WIPF1-006

Description

WAS/WASL interacting protein family, member 1 [Source:HGNC Symbol;Acc:12736]

Gene Synonyms

PRPL-2, WASPIP, WIP

Location

Chromosome 2: 175,426,932-175,547,611 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 18 domains and features, is associated with 45702 variant alleles and maps to 373 oligo probes.

Gene

This transcript is a product of gene ENSG00000115935.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392547.2	WIPF1-001	4587	503aa	ENSP00000376330.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2260	C9JTB9 O43516	NM_003387.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000272746.5	WIPF1-004	3028	510aa	ENSP00000272746.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTB9 O43516	NM_001077269.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409891.1	WIPF1-005	2568	493aa	ENSP00000386431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTB9 O43516	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392546.2	WIPF1-002	2180	503aa	ENSP00000376329.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2260	C9JTB9 O43516	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359761.3	WIPF1-006	2003	503aa	ENSP00000352802.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2260	C9JTB9 O43516	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409415.3	WIPF1-003	1772	403aa	ENSP00000387150.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTB9 E9PB87	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410117.1	WIPF1-016	777	131aa	ENSP00000386757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZ90 C9JTB9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455428.1	WIPF1-017	488	157aa	ENSP00000391785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JB04	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000436221.1	WIPF1-014	373	99aa	ENSP00000388454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTB9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467149.1	WIPF1-019	745	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470752.1	WIPF1-010	638	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469002.1	WIPF1-018	624	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490887.1	WIPF1-011	613	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487291.1	WIPF1-009	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488830.2	WIPF1-012	788	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480400.1	WIPF1-015	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474332.1	WIPF1-013	588	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,003 bps, Translation length: 503 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43516

CCDS

This transcript is a member of the Human CCDS set: CCDS2260

Version

ENST00000359761.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000334133 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000359761.3 WIPF1-006

Summary