Transcript: ENST00000409059.1 SLC5A7-002

Description

solute carrier family 5 (sodium/choline cotransporter), member 7 [Source:HGNC Symbol;Acc:14025]

Gene Synonyms

CHT, CHT1, HMN7A, hCHT

Location

About this transcript

This transcript has 9 exons, is annotated with 19 domains and features, is associated with 11079 variant alleles and maps to 420 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264047.2	SLC5A7-001	5152	580aa	ENSP00000264047.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2074	F5H382 Q2T9H3 Q9GZV3	NM_021815.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409059.1	SLC5A7-002	2032	580aa	ENSP00000387346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2074	F5H382 Q2T9H3 Q9GZV3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540517.1	SLC5A7-201	1914	475aa	ENSP00000445351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H382 Q2T9H3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,032 bps, Translation length: 580 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9GZV3

CCDS

This transcript is a member of the Human CCDS set: CCDS2074

Version

ENST00000409059.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000330879 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.