Human (GRCh37.p13)
Description

orthodenticle homeobox 1 [Source:HGNC Symbol;Acc:8521]

Location
About this transcript

This transcript has 5 exons, is annotated with 21 domains and features, is associated with 3646 variant alleles and maps to 362 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000282549.2OTX1-0012861354aaENSP00000282549.2
 
Protein coding
CCDS1873B4DM62 P32242 Q9P2R2
NM_014562.3Ensembl CanonicalGENCODE Basic
ENST00000366671.3OTX1-0022861354aaENSP00000355631.3
 
Protein coding
CCDS1873B4DM62 P32242 Q9P2R2
NM_001199770.1GENCODE Basic
ENST00000405984.4OTX1-0051694101aaENSP00000385782.4
 
Nonsense mediated decay
B5MC54 --
ENST00000484066.2OTX1-0031244No protein-
 
Retained intron
---
ENST00000477348.1OTX1-004624No protein-
 
Retained intron
---
ENST00000476383.1OTX1-006564No protein-
 
Retained intron
---
Statistics

Exons: 5, Coding exons: 3, Transcript length: 2,861 bps, Translation length: 354 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P32242

CCDS

This transcript is a member of the Human CCDS set: CCDS1873

Version

ENST00000282549.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000251617 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.