Transcript: ENST00000467371.1 SPTBN1-005

Description

spectrin, beta, non-erythrocytic 1 [Source:HGNC Symbol;Acc:11275]

Gene Synonyms

ELF, HEL102, SPTB2, betaSpII

Location

About this transcript

This transcript has 4 exons, is associated with 3597 variant alleles and maps to 347 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000333896.5	SPTBN1-002	9075	2155aa	ENSP00000334156.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33199	Q01082 Q8WYB3	NM_178313.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356805.4	SPTBN1-001	8482	2364aa	ENSP00000349259.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33198	B2ZZ89 D6W5C0 F8W6C1 Q01082 Q53RC4	NM_003128.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389980.3	SPTBN1-003	2164	690aa	ENSP00000374630.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W6C1 Q53RC4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467371.1	SPTBN1-005	3332	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602898.1	SPTBN1-006	2942	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496323.1	SPTBN1-004	2225	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,332 bps,

Version

ENST00000467371.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000258119 (version 1)