Transcript: ENST00000586686.2 RPS15-001

Description

ribosomal protein S15 [Source:HGNC Symbol;Acc:10388]

Gene Synonyms

MGC111130, RIG, S15

Location

Chromosome 19: 1,438,386-1,440,583 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 1570 variant alleles and maps to 262 oligo probes.

Gene

This transcript is a product of gene ENSG00000115268.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000591804.2	RPS15-013	697	112aa	ENSP00000474543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM56 S4R456	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593052.1	RPS15-002	629	152aa	ENSP00000466010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELC2 K7EM56 K7EPN6 S4R456	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586686.2	RPS15-001	599	145aa	ENSP00000467676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12067	K7EM56 K7EPN6 P62841 S4R456	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586096.2	RPS15-011	571	129aa	ENSP00000465055.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ78 K7EPN6 S4R456	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591032.1	RPS15-008	550	112aa	ENSP00000474970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM56 S4R456	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000233609.4	RPS15-006	533	118aa	ENSP00000473953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM56 S4R456	NM_001018.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589656.2	RPS15-004	468	141aa	ENSP00000467855.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPN6 K7EQJ5 S4R456	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585665.1	RPS15-010	460	112aa	ENSP00000466366.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM56 S4R456	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586656.1	RPS15-005	436	68aa	ENSP00000475096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R456	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592623.1	RPS15-012	872	78aa	ENSP00000474433.1	Nonsense mediated decay		S4R3J3	-	-
ENST00000592588.2	RPS15-009	518	28aa	ENSP00000467466.2	Nonsense mediated decay		K7EPN6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592700.1	RPS15-003	1610	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 599 bps, Translation length: 145 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62841

CCDS

This transcript is a member of the Human CCDS set: CCDS12067

Version

ENST00000586686.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000449609 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000586686.2 RPS15-001

Summary