Transcript: ENST00000438166.2 GPD2-002

Description

glycerol-3-phosphate dehydrogenase 2 (mitochondrial) [Source:HGNC Symbol;Acc:4456]

Gene Synonyms

GDH2, GPDM, mGPDH

Location

Chromosome 2: 157,292,901-157,439,570 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 28 domains and features, is associated with 58731 variant alleles and maps to 577 oligo probes.

Gene

This transcript is a product of gene ENSG00000115159.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310454.6	GPD2-001	6041	727aa	ENSP00000308610.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2202	E7EM56 F5GYK7 F8W6E4 P43304 Q53RD0 Q53T76	NM_001083112.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438166.2	GPD2-002	2457	727aa	ENSP00000409708.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2202	E7EM56 F5GYK7 F8W6E4 P43304 Q53RD0 Q53T76	NM_000408.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409674.1	GPD2-003	2397	727aa	ENSP00000386425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2202	E7EM56 F5GYK7 F8W6E4 P43304 Q53RD0 Q53T76	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540309.1	GPD2-202	1961	379aa	ENSP00000440892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EM56 F5GYK7 Q53RD0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409125.4	GPD2-201	1939	500aa	ENSP00000386484.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W6E4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415049.1	GPD2-008	456	109aa	ENSP00000412621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EM56 Q53RD0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000409861.1	GPD2-012	2640	727aa	ENSP00000386626.1	Nonsense mediated decay		E7EM56 F5GYK7 F8W6E4 P43304 Q53RD0 Q53T76	-	-
ENST00000416888.1	GPD2-005	537	56aa	ENSP00000387475.1	Nonsense mediated decay		E9PDK4 Q53RD0	-	-
ENST00000430992.1	GPD2-006	496	56aa	ENSP00000408522.1	Nonsense mediated decay		E9PDK4 Q53RD0	-	-
ENST00000496190.1	GPD2-010	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495851.1	GPD2-007	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492005.1	GPD2-009	437	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464846.1	GPD2-011	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,457 bps, Translation length: 727 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43304

CCDS

This transcript is a member of the Human CCDS set: CCDS2202

Version

ENST00000438166.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000332647 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000438166.2 GPD2-002

Summary