Transcript: ENST00000265593.4 CLCN2-001

Description

chloride channel, voltage-sensitive 2 [Source:HGNC Symbol;Acc:2020]

Gene Synonyms

CIC-2, CLC2, ClC-2, ECA2, ECA3, EGI11, EGI3, EGMA, EJM6, EJM8, clC-2

Location

Chromosome 3: 184,063,973-184,079,439 reverse strand.

About this transcript

This transcript has 24 exons, is annotated with 42 domains and features, is associated with 7763 variant alleles and maps to 752 oligo probes.

Gene

This transcript is a product of gene ENSG00000114859.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265593.4	CLCN2-001	3290	898aa	ENSP00000265593.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3263	P51788	NM_004366.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344937.7	CLCN2-004	3187	881aa	ENSP00000345056.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54691	P51788	NM_001171087.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423355.2	CLCN2-201	3160	126aa	ENSP00000412226.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P51788	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434054.2	CLCN2-003	2897	854aa	ENSP00000400425.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54690	P51788	NM_001171088.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457512.1	CLCN2-002	2820	869aa	ENSP00000391928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54692	P51788	NM_001171089.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430397.1	CLCN2-006	1844	133aa	ENSP00000396231.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000475279.1	CLCN2-007	315	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485667.1	CLCN2-005	1652	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465231.1	CLCN2-009	601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491162.1	CLCN2-008	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,290 bps, Translation length: 898 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51788

CCDS

This transcript is a member of the Human CCDS set: CCDS3263

Version

ENST00000265593.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000345571 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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All species

Recent locations

Transcript: ENST00000265593.4 CLCN2-001

Summary