Transcript: ENST00000476228.1 TFG-004

Description

TRK-fused gene [Source:HGNC Symbol;Acc:11758]

Gene Synonyms

FLJ36137, HMSNP, SPG57, TF6, TRKT3

Location

Chromosome 3: 100,428,450-100,467,808 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 17413 variant alleles and maps to 340 oligo probes.

Gene

This transcript is a product of gene ENSG00000114354.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000240851.4	TFG-001	1978	400aa	ENSP00000240851.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2939	C9JJP5 C9JTY3 C9JUE0 Q92734	NM_006070.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476228.1	TFG-004	1783	396aa	ENSP00000417952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56266	C9JJP5 C9JTY3 C9JUE0 Q7Z427 Q92734	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418917.2	TFG-002	1716	396aa	ENSP00000397182.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56266	C9JJP5 C9JTY3 C9JUE0 Q7Z427 Q92734	NM_001007565.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490574.1	TFG-003	1696	400aa	ENSP00000419960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2939	C9JJP5 C9JTY3 C9JUE0 Q92734	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487505.1	TFG-007	913	181aa	ENSP00000420797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJP5 C9JTY3 C9JUE0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000479672.1	TFG-006	776	128aa	ENSP00000419559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTY3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000463568.1	TFG-008	723	157aa	ENSP00000419504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTY3 C9JUE0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000481203.1	TFG-005	3271	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,783 bps, Translation length: 396 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92734

CCDS

This transcript is a member of the Human CCDS set: CCDS56266

Version

ENST00000476228.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000353245 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000476228.1 TFG-004

Summary