Transcript: ENST00000487424.2 RBP1-004

Description

retinol binding protein 1, cellular [Source:HGNC Symbol;Acc:9919]

Gene Synonyms

CRABP-I, CRBP, CRBP1, CRBPI, RBPC

Location

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 5319 variant alleles and maps to 244 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000483943.2	RBP1-003	1935	153aa	ENSP00000424813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46925	P09455	NM_001130993.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492918.1	RBP1-002	1487	157aa	ENSP00000429166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46926	P09455	NM_001130992.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000232219.2	RBP1-001	898	197aa	ENSP00000232219.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3110	-	NM_002899.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487424.2	RBP1-004	1072	150aa	ENSP00000427492.1	Nonsense mediated decay		H0YAK8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000474490.1	RBP1-005	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,072 bps, Translation length: 150 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000487424.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000341498 (version 2)