Transcript: ENST00000494664.1 TIMMDC1-001

Description

translocase of inner mitochondrial membrane domain containing 1 [Source:HGNC Symbol;Acc:1321]

Gene Synonyms

C3orf1, FLJ22597

Location

Chromosome 3: 119,217,379-119,243,937 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 11164 variant alleles and maps to 405 oligo probes.

Gene

This transcript is a product of gene ENSG00000113845.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000494664.1	TIMMDC1-001	2394	285aa	ENSP00000418803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33831	Q9NPL8	NM_016589.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493694.1	TIMMDC1-004	710	151aa	ENSP00000419510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JU35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466984.1	TIMMDC1-008	605	150aa	ENSP00000420122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JR82	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000264244.3	TIMMDC1-002	1271	175aa	ENSP00000264244.3	Nonsense mediated decay		G3XA94	-	-
ENST00000492164.1	TIMMDC1-005	725	90aa	ENSP00000418846.1	Nonsense mediated decay		F8WC42	-	-
ENST00000498399.1	TIMMDC1-009	684	38aa	ENSP00000420812.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000463927.2	TIMMDC1-006	670	65aa	ENSP00000417205.2	Nonsense mediated decay		F8WAU6	-	-
ENST00000486418.1	TIMMDC1-003	551	71aa	ENSP00000417083.1	Nonsense mediated decay		F8WB00	-	-
ENST00000469324.1	TIMMDC1-007	634	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,394 bps, Translation length: 285 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NPL8

CCDS

This transcript is a member of the Human CCDS set: CCDS33831

Version

ENST00000494664.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000355077 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000494664.1 TIMMDC1-001

Summary